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Ecommerce Accountants for Online Sellers

Selling online is a numbers game across more channels than ever. We help Shopify, Amazon, eBay and Etsy sellers make sense of payouts, fees, refunds and VAT — with a dedicated named accountant, a fixed monthly fee and cloud books that tie every platform together so you always know your true margin.

E-commerce & Retail

What's involved

Here's exactly what's involved — and how your own named accountant handles each part for you.

Selling across channels, reconciled to the penny

Every marketplace pays you differently, and the headline payout is rarely the real picture once selling fees, advertising, refunds and reserves are stripped out. Without a tidy system it is easy to mistake turnover for profit.

VAT for online sellers, made manageable

VAT is where most e-commerce businesses come unstuck. You must register once your taxable turnover passes the £90,000 threshold, and from there choosing and running the right scheme matters for both cash flow and compliance.

Marketplaces, imports and the deemed-supplier rules

For certain sales, online marketplaces are treated as the deemed supplier and account for the VAT themselves — for example goods imported in consignments of £135 or less, and some sales made by overseas sellers. Knowing when this applies keeps your own returns accurate.

Selling into the EU after Brexit

Cross-border sales bring customs, duties and extra VAT steps. For B2C sales to EU consumers, the One Stop Shop can simplify how you report VAT, and for imports into the EU of €150 or less the Import One Stop Shop can do the same.

Stock, margins and the numbers that matter

Inventory is usually your biggest cost, so getting stock accounting and cost of goods sold right is what turns a busy shop into a profitable one. We track these properly and translate them into live cloud reporting on margin, cash and your best-selling lines.

Cloud-first and easy to switch

We run your books in Xero, QuickBooks or Sage with your sales channels feeding in automatically, so reporting is always current. Moving to us is paperless and usually takes a few days — we collect your records under professional clearance and set everything up for you.

What's included

  • Multi-channel payouts, fees and refunds reconciled
  • VAT registration and the right scheme for your shop
  • Marketplace deemed-supplier rules explained
  • OSS and IOSS guidance for EU sales
  • Postponed VAT accounting for imports
  • Stock and cost of goods sold done properly
  • Integrations such as A2X and live cloud reporting
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Last reviewed: June 2026. This page is general guidance, not advice — figures relate to the 2025/26 UK tax year and may change. Please get in touch for advice tailored to your circumstances.

FAQ

Frequently asked questions

  • You must register once your taxable turnover passes the £90,000 threshold, though you can register voluntarily before that if it helps you reclaim input VAT. We monitor your turnover and handle registration and returns when the time comes.

Get started

Ready to work with an accountant who's genuinely on your side?

Book a free, no-obligation consultation and we'll show you exactly how MMR can help — with a clear fixed-fee quote and no pressure.